Detail information of PDX-SC00309

  • Growth Properties

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  • Pathology Diagnosis

Tumor size: There is an ulcerative mass on the greater curvature side of the stomach, with slightly raised mucosa around the ulcer area, measuring 3.5 × 3 × 0.9cm, section gray white, solid, medium in texture, invading the entire layer.

Histological type: Tubular adenocarcinoma (Adenoid immersion growth, cellular atypia, large nucleus, and frequent nuclear division).

Histological grading: Moderately differentiated.

IHC: CK-P (+), Her-2 (5+), Ki-67 (hot spot positive rate is about 60%).

  • Gene mutation in WES

Table 1.  Gene mutation  (Partial)


Gene

Hgvs

Priorit

EGFRp.R468K

L

ALK

p.K423R; p.K1491R; p.I393V; p.I1461V; p.D461E; p.D1529E

L

TP53

p.P33R; p.P72R

L

PTCH1

p.P1315L; p.P1249L; p.P1164L; p.P1314L; p.P1263L

L

BRCA1p.E991G; p.E1038G; p.S1566G; p.S1613G; p.S509G; p.S1634G; p.K1183R; p.K1136R; p.P824L; p.P871LL

BRCA

p.N372H; .V2466

L

CSF1R

p.H362

L

FLT3

p.D7G; p.T227

L
EZH2

p.D185H; p.D146H; p.D176H

L




  • Gene fusion in RNA-seq

Table 2. RNA-seq Results (Gene fusion)

PDX ID

Gene 1_ Gene 

SC00309

AC098850.5_FUS
DDX6_IGH
ETV6_CHIC2
CCND2_TRA
ACTB_ARID1A
PICALM_MLLT10
IGH_CCND2